LOCUS BG068773 639 bp mRNA linear EST 12-MAY-2010 DEFINITION H3069B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3069B08 3', mRNA sequence. ACCESSION BG068773 VERSION BG068773.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 639) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068773.1. Other_ESTs: H3069B08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3069 row: B column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..639 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3069B08-3" /db_xref="taxon:10090" /clone="H3069B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 218 a 104 c 119 g 198 t ORIGIN 1 gccttggagt ggctcgatta gatactttct ggtttttcag taaatgtgtc aaaatgtagt 61 ttaattaatg agcacatata gcaaaccatt cttttgcctt gagttttaga catcagtgtg 121 cttaagaaag gagtccaggt aagacaaagg ctctgcctgt ccatgtggca tattgtattc 181 tcttgtaatg tatagtcaac tctaaagtaa aaaaaaattt gaaagaaaaa tttctttatg 241 aaaaagtgat gccaaaacca cagaggtctg ttatcgagta aacaatttta aaaaatatag 301 aaggaagact gaagcaacaa atcagaaaca gttcatcctg cctcccccaa atcaagaaaa 361 ccatgcgctg actgcgtcca aacattcatt tcttaaaata agaacgacat cgggagtgta 421 agtgcagttc taatgtattt gatatcaacc tatgtaatta tttcttattt agttaaagga 481 atgtaatgca ggttaaaagt tgcactgttt tactaacgac gtaatatcat ttttcgctgt 541 tctcaaaacg tgtgtcatga ttgtacagag cagattctac aaattgataa gctggtttac 601 tgagaaccag tcatgaggga tctagctgtt attcaaaat //