LOCUS BG068762 728 bp mRNA linear EST 12-MAY-2010 DEFINITION H3069A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3069A09 3', mRNA sequence. ACCESSION BG068762 VERSION BG068762.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 728) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068762.1. Other_ESTs: H3069A09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3069 row: A column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..728 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3069A09-3" /db_xref="taxon:10090" /clone="H3069A09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 216 a 157 c 112 g 243 t ORIGIN 1 atgaaagaca tatttgaatt tatataatag taaatatgtc tgtgtattta aaaaaacagt 61 gcttagaact tcttcaattc cctcctttga gaaatacttg aaggtgacta taactttaaa 121 actgcatgaa cttagcattt acgacgttct tcaaaggcag ctcctttttc actttgtact 181 tgtttgaaca aattctgttt tctgattgtg ctgtatcagt aacttaatgc atgctctgaa 241 gtgccttaaa atgggattct gaaaatacac aacctccagg caacttttca gctcataaaa 301 ttacttcatc catcactcca tattcccaat tatatagtct ttattcaaag ttctttaatt 361 tgtctgtgat tcatcaacag tgtcctgctt aaactatcat cacaaccaga gagactgtgt 421 gtctaagtgt tttattataa acaatgtact gatgcacatg aatggcaatc gaagactgct 481 ttgcttaaat tataagaatt ttttttaatg tgtagccctc aactcagcct caaggtaccc 541 catcttcact tacctagtca tctagccatg aggacagaag acaaagtcct aaccatccca 601 tttccacttg tgacccacgt cacagggttt ccactctgtt atggtaagtg actctgactt 661 cactccagaa acaatggcct ccatggtact cagtcaacat taccttttca tgctgtgctg 721 gtcaggag //