LOCUS BG068720 698 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068F03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068F03 3', mRNA sequence. ACCESSION BG068720 VERSION BG068720.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 698) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068720.1. Other_ESTs: H3068F03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: F column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..698 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068F03-3" /db_xref="taxon:10090" /clone="H3068F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 159 a 142 c 146 g 251 t ORIGIN 1 gtttgagacg tgctctctac atagccttga ctgttgtgga actcactgtg tccacaagta 61 tctatactta actttacaat gttagatcat gtgatctatg tgtgagattg cctttttaga 121 aagttatatt gcgcttactt taaatttttt atggtttttt ttgtttgttt gttttatttt 181 ggtgtcttgt tttgttttgt tttaatggtt tttcaagaca gggtttctct gtatagccct 241 ggctgtcctg gaactcactt tgtagaccag gctgtcctca aactcagaaa tccacctgcc 301 tctgcctccc gagtgctggg attaaaggtg tgcgccacca cgcccggcta tatctgtatt 361 tatttatgtg gtaattaggg agataggaat ttaagtaacc aactaaactc tcgcccttct 421 gtgctaggag tgctgggatt acatgcctct atgcctggcc tgcttgtgtg tgtagacatg 481 tgttgctaca tagatcagag gtcaacactg ggtatcttgc cagtcactgt ccatcttact 541 ctttgagata agctctctta ctaaatgcat agctcaccca ttatagctag gttaactgct 601 tgtccacctt taggatggta tgcatccatt atcatacctg acttttcagt gtggatgctg 661 gagataaaaa gaacccgtgc ttacatagca agtacata //