LOCUS BG068704 558 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068D11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068D11 3', mRNA sequence. ACCESSION BG068704 VERSION BG068704.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 558) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068704.1. Other_ESTs: H3068D11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: D column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..558 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068D11-3" /db_xref="taxon:10090" /clone="H3068D11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 137 a 138 c 117 g 166 t ORIGIN 1 atatgcccat cagtgcaatc tgctttattt gacataaggc aagtgggaca gtctcttttg 61 aatggatttt tgtcttttgg aagagccagg taagagtttc attcttaaaa ccacgttttc 121 tttaatgccc aaacatgtca atttcgtctt cctttctggt cactccttgg cagtcagcga 181 gtagtcaaag attaatgtcc gagcaggccc gtacctttaa agccctcttc cggcatacaa 241 acttgcatga catcatccat tgcagcgtag tctgaattag gttcatcagc ctttaacaaa 301 atgacagact caggaatgac gccgagggta ccaagggtgg cacagtcgtc gtttaaaatc 361 tttccatcaa ttgacaaatt ctggtcaaat ggagcaactg aaaatgcgtg catgatctga 421 atcttcaatt cttttaacgt ctggttggca gacaccaaca gtgccttctc tccccgaacc 481 ttcctgtgcc tcgtgctcct ccggatgacc tgcttctggt aggccacaca gccctgtagg 541 gatgtcttct gtcgcttg //