LOCUS BG068676 809 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068B06 3', mRNA sequence. ACCESSION BG068676 VERSION BG068676.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 809) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068676.1. Other_ESTs: H3068B06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: B column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..809 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068B06-3" /db_xref="taxon:10090" /clone="H3068B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 227 a 169 c 189 g 224 t ORIGIN 1 gcatctttgt gggtaaaaaa atgtgtaaga tcggttagtg ggcttacatg cccacagagg 61 acctgaagga gcttatgtag gtgaagggac ctctcagacc acgagcagtt cctgagacgt 121 aaatgatctc aatgctttgc acagcaggcc catctccaga acattcccac agccattcca 181 ctgacatctg gggaccacaa accctcatga gctcatggga tcatagtcta tatagtttgt 241 attcagtttt ttttttttta agagggatca tcgattgcct gtctgatagg aaccagaggc 301 ccactttgtt ttcttctttt tgcaactcaa aggctgtata acaagcttag gttgtactta 361 acttcattct gtgtagtgtt cacaatgaac aatgtaacag agttgtgaga acccattatc 421 ctcattttta caattgcttc accttagatc ctggaaagtg atgctatcaa cacacattct 481 gattcacaag gggcgatctt tctcacctgg aactggataa tatttgtgat gcttcttggt 541 tactagaatg gtccttagga gataaaatag gagttgagca tgatacacag acataggact 601 ccaccacaga atttatcact cataataaaa cggggaggtt tcagtggaga ttctgtgggt 661 agagttatga gaactgttaa aggcacaagg gcaatgaagc tcccacagtg agtgacagct 721 cagttggaag ccactgtccc tgcagagctg aagggtaagg gactctagca gccaccttga 781 gctggaactc cactagggag ctggctgag //