LOCUS BG068648 807 bp mRNA linear EST 26-JAN-2001 DEFINITION H3067H02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3067H02 3', mRNA sequence. ACCESSION BG068648 VERSION BG068648.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 807) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3067H02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3067 row: H column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..807 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3067H02-3" /db_xref="taxon:10090" /clone="H3067H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 243 a 156 c 194 g 214 t ORIGIN 1 aaatgtagaa ggtaagattt aataaagtag caacaacatg aaagcacaca gaccagagct 61 ctggggtcga aataaagcag caacatggaa gcacacagag ctctggggtc gaaactcata 121 caccttagca cagggtagag gagtctcgac gaccagccaa aatttttcac aggcttatat 181 agtaaaactc aaagggggga gaactgggca gggaaagtac aagtttacat cactagggag 241 ttctgccaag ggacaagggg ttctgccaaa ggattctacg taactaagga gtcatgtcct 301 atcaaggaac ctacgtaact aaggagtcat gtcctatcaa ggaacctacg taactaagga 361 gtcatgtctt atcatttggc aatgtcattt tgaggttgtt ccaggaggcc tttatctcaa 421 aaatgttttc tagatgggag ggggtgggct ccgaggtgaa agttcatgtt ctcacaagag 481 gccagtaatt tttcattctt cattccccac ttcttcttgt aagtaattct aatcttagaa 541 tttcagaagt ctatatctct atgtggagaa tactgcattt actctatctt taacatggga 601 acagaaacag aataaggcag attagtaaac agaactaggc agggaccctt ttagtgaggc 661 ttgagggtct cagcatgacg caggtgtacg tagatcagat ctctggctgg aactggtaag 721 atgtccttgg ggtaccagct cgttcgctgt agccagttgt gaccagactt tttttctgca 781 cacctgtgag ccttttaact tagtata //