LOCUS BG068398 780 bp mRNA linear EST 12-MAY-2010 DEFINITION H3065A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3065A09 3', mRNA sequence. ACCESSION BG068398 VERSION BG068398.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 780) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068398.1. Other_ESTs: H3065A09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3065 row: A column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..780 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3065A09-3" /db_xref="taxon:10090" /clone="H3065A09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 267 a 167 c 130 g 216 t ORIGIN 1 agttagtttc atactctggc catttatcct cagtccagga catagatttc aaagatcccc 61 tacccctgcc ctcacttccc tgtggctgct tcttctctag actctgctga atagaggcat 121 cttggtttta taagagtttg tttgttagtt atttgtctta attccagaga aatttttcta 181 ccaatggggt tgaggcaggg tcagatggac tcactgcaaa aatctaccag aaactcaagt 241 acaacaccaa tactgctcaa ctattaccta aagtagcaaa ggaaagaagg cttcgaaact 301 cttatgaagc cagcattata ctgatatcaa agccaaataa agaaaaaaaa agcataaaag 361 aagaaaaaag ataactttac accatgatct tcctgctaaa ttcagatata tgtccgggaa 421 ttcctcaata aaatgctcac aaacctgggt aagatcattc atcatgatca agttggctca 481 aaagccaata aatataattt gtcacataag tgaactgaaa gacaaaaatc acatgatcat 541 ctcaatagta acagaaaaag tcttagataa aattcaatat tccttcatga caagtctaac 601 catactgttg gccccttcct cccactcctg acttcattca aggatctctt tcctttcccc 661 tccattcttt ttcctctact atctggagtt agaggtttga aagggtggaa ggaaaggggt 721 agaagaaaga agaacccaca aagtagcaaa agtccagcta catctgatag ttaaaagctg //