LOCUS BG068292 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063H02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063H02 3', mRNA sequence. ACCESSION BG068292 VERSION BG068292.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068292.1. Other_ESTs: H3063H02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: H column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063H02-3" /db_xref="taxon:10090" /clone="H3063H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 137 c 124 g 188 t ORIGIN 1 aataatatta aattttttat tcatccatat ggttttgtga tcaagttagt aaaaaaaaac 61 tttttttaaa aatcatttgg gtcaatacaa atgtgacaga cagacctaca gaaagcggcc 121 tgtataagca caacatgact gctgactttc agagtggaga aaggattcta ccagaatagt 181 ttctctcatg ttagaaatga gcatgtttta taaaataaaa ccgaagtccc tcagtcacag 241 ctctgagcta ccagcctgag acacacttta ttctttaata ctcgtagtct gacacttttt 301 gtattacaaa aagttagcga taaatctgat gaagatcata tagctgtaaa tacttcaata 361 tagcctcttg taagcccaac atttaagatg gccagaacca aactatatat taaacagaac 421 ataaataaga ccgtaaataa ataaatgaag aagataaaat cgtacggtac aactacacaa 481 aattctatga acattttcac tggtcaaact atgatgctga agacggcacc ttcatttagt 541 caacctctgc tgctcaactg gatcctggcc aggaagggtg gacagcatgg ccttcctcca 601 gttacctaca gggcgctggg cagcgtggga ggtctgtgct cagccaccac ccaggctctt 661 gtagttcaag tagtgtcc //