LOCUS BG068271 730 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063F04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063F04 3', mRNA sequence. ACCESSION BG068271 VERSION BG068271.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 730) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068271.1. Other_ESTs: H3063F04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: F column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..730 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063F04-3" /db_xref="taxon:10090" /clone="H3063F04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 155 c 108 g 235 t ORIGIN 1 aacaagtagg atctccataa aaaggtttga tttttggtga attaggccac ctccatgggt 61 agtggaatgt ttttaatttc ttgcctctct tcccaatgtt tatcaagcag ccactgtaat 121 atcattccct tttcgaactc acttcccttt cttctcccta agacggaccc tatattaacc 181 taaaaacaca aaacaactta atttacaagc ctctcaagcc tctcaaagtg caaattatga 241 tacaatttca taagattcat atacacatag cattttatac aataaagtac agatttctgc 301 tcataaatta acccacttac acatctactt tcaaagggct ggccacttta agtgacccaa 361 agacttatta aagttaatac aattgaactt tacaagtttc caaaccaaaa taaagttgct 421 cttacacata accacatata tacatatttt aaaatgctct tttgatgctt aggtatagac 481 aaacaacttg cttaaataca gacaaattga tcgagataca gaaactcaag aattgcagct 541 tgatttctgt cctgcacatg ttgtatacaa tgttaaaaaa ataacttgtg caatgattta 601 ttttacttct ttctgtagcg tctgttcatc cggtagctct ttgtgaaggg gtcgtgacct 661 ctggagaacc acactgagtt cctcgatgac cttcgatggc agcttaggat ctgcgtctaa 721 ggtagctttg //