LOCUS BG068114 658 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061H08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061H08 3', mRNA sequence. ACCESSION BG068114 VERSION BG068114.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 658) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068114.1. Other_ESTs: H3061H08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: H column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..658 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061H08-3" /db_xref="taxon:10090" /clone="H3061H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 121 c 153 g 210 t ORIGIN 1 atggcttagg attttttgat tgtttatgtt tttagacaag gtctcactat gtgaccaggt 61 tatttgaagt ttgtctccct tgttgtttca gggaagacaa actgtctgtc cctctgttgg 121 ttcaggttga aactggcaat ccctattagc cagagaaaag catgcagata taagttttct 181 atagtacaag aaatcataaa tgaagtaaga tcccgataaa cctgagtgtt cctctgctgg 241 gtgtgacgga gaatggagag ctgtggagaa atggtctgat ataaagattt taaattggga 301 gccttagcaa gacctcaagt gtaagacaaa gacagggatg atcctggggt agggagaaca 361 catctcatcc gcttgctttt acaagcgccc acaggagcat cctaggattt gactgaggga 421 aaggccagaa actccccgta ggtgttagga cctgcttcca gagagaagga aaatgccaaa 481 tgtccttcct gcttttgttt gtaggagagt gtcttcaagc gtggttattt tgctggttct 541 cattcttata ttagagtaaa cttccgagaa gtacactttg tatttcatcg tttttcttcc 601 gtaatacacc ttttgacaca cttgcatcac tttttgcaat gatttctttg ctttgtgc //