LOCUS BG068039 562 bp mRNA linear EST 17-DEC-2003 DEFINITION H3061A12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061A12 3', mRNA sequence. ACCESSION BG068039 VERSION BG068039.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 562) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT On Jan 26, 2001 this sequence version replaced BG068039.1. Other_ESTs: H3061A12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: A column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..562 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061A12-3" /db_xref="taxon:10090" /clone="H3061A12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 114 c 101 g 168 t ORIGIN 1 gagttgggaa gatccaactt taatctgggc cacaccttct gtggcagtct atataaagga 61 catggaagaa agacactttg ctctttgcct gtttgccctt gatcacaatt taccggcatt 121 agaacaaatt aaattacagg atttcaatgt atactgaaga ccaaacaaga gatccagcat 181 catgggctgg acaactattg gattttctgt agggagacag ccatcattgg actagctgga 241 ccacagcctg taaagaactc taataaatat cccatatata tgaatattcc catatatgtg 301 aatatatatc ctgtatacat gaatattcat atatgttcat tctatcagtt ttgttccttt 361 agataaccct gactaataca ctgatataac aaaagatatg gagaggtctg gagacctcca 421 tggttgaaag aactggctgt tcttccagaa gtcctgaatt caattcttag catcctcata 481 gtggctcatg acatctataa ctgtattcct atgggatcca atgccctctt ctgatatgca 541 aatgtatatg cagacaaaac ac //