LOCUS BG068031 779 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061A04 3', mRNA sequence. ACCESSION BG068031 VERSION BG068031.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 779) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068031.1. Other_ESTs: H3061A04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..779 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061A04-3" /db_xref="taxon:10090" /clone="H3061A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 248 a 159 c 175 g 197 t ORIGIN 1 aaagagaatg ctagaacctc tttattagaa tagtcgatca ggtcatggta agggaacaga 61 caatgacaag aaataagcct agtcaataaa aaccaggcac atgctttaaa tcctgcgtta 121 cagcaacgga taatttgagt gaaacatagc atcagctact gcctgcattt tgtgaaggag 181 taaggaaaga gccggagatc ggcccaagat aattggctat ggaaaaatgt tacctccatg 241 tgccactccg aaaatgaata taatggaaat gagggcttga ggaaaaaaaa tataagatct 301 gaggagataa ggtgaaatgc ctttctgcag aacttcagtg ctgaaccgag gtccctttgt 361 cacgcatggc tacagatcgc gtgtgtgatt tgtgacactt catgcggtgt gatttggggg 421 tttctctgta tgaaaactca agtgcagctg gtgacaaaag tcttataata aaaagagaaa 481 acagatttat ctcgcaggat tcccaagggc atagaaaccc atccacacag aggctcacat 541 tctgctatct attaactgtt acacacttcg gagacacagt caaaatttcc agactcctgt 601 acaaagtttg gtaagcagtc ctctctgata tattgatccc tcacctacag ggcaactgaa 661 atcaccagca attatttctt tatcccattg gtggggccat tcaaggcctc actctgaagc 721 tccgaggctg caggtctgaa ggatgaagta agtcttagtt tagctgagct cacatctcg //