LOCUS BG067994 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060E11 3', mRNA sequence. ACCESSION BG067994 VERSION BG067994.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067994.1. Other_ESTs: H3060E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060E11-3" /db_xref="taxon:10090" /clone="H3060E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 135 c 143 g 220 t ORIGIN 1 acatttgaac agtttatttt actattgtag tctactctgc actgttaggt tctctggccc 61 catacagtat acttttggaa cgtacaaact tggtgtagtt tacttacatt ttaacaatgc 121 tcatgccatg attataaaag attagcacca gtctctactg ttctcaactt ccacaccact 181 gtggcttcct gtgtagctag gatggaatta ttcaaactta tttctttatt gaagccacac 241 caaaagatgc aaaccaggag gcatttcatg atcctggcca acatatgtac ataaatatgc 301 ttcacaaact gtgtaagatt aaggaaactt acatcaatta atatattacc caattttttc 361 caatgccaaa tgctacctca gcttttgttc tcacctgatg tccacacatc taatttcatt 421 gcctgagagc tgtccattta gaacaacaca gtatgaatac gggttatttc aaaggtgatc 481 tgagacgtgc agttatctct ggagctagtg aaggatagaa tgaatgttag gttcttggct 541 gcaaggctcg gtatgttgaa gtgcattgat tggatgcttt gatagagaga gaagggtttg 601 cagtttccac cttcccacaa ggtttagttt gggggacaaa gggtgaggtt acgggacagg 661 tgtgagagca atcctggtta cagtctagtc caaaagt //