LOCUS BG067978 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060D05 3', mRNA sequence. ACCESSION BG067978 VERSION BG067978.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067978.1. Other_ESTs: H3060D05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060D05-3" /db_xref="taxon:10090" /clone="H3060D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 181 a 126 c 125 g 176 t ORIGIN 1 caaaaaatat ttaattgtcc tctagcagac aagtgctaaa gtcttgctta gcctcagact 61 cctctggaaa atggtgggac attctgctag tggacctatt agaaacctat ttaggtttgg 121 acacagcaca gcaatgggta ttggcatacc agacccctcc ctttggcttc ttgattacca 181 gaaggtgaag gactttaccc accacaagct ccttgctatt tatgtcctgc cttctgtcag 241 accacaaagt agtggtgccc actgaccatg ggttgaatct ctaaggcttg agccaaaata 301 acttctcttc catcaaggtt gatttgtcaa aagtatttgg ccatattgat aaaaataaac 361 acattggctt tttattgtga aaagtgagta aattatccaa atggagaagg gtattgtatt 421 aattcatgct gagcattaca gacaattttt ccatattgag tttttgtctg ctcttcttct 481 gcctggaaga aatatcttag tgttggggat gagtaagaat gctttttcaa tagacaccca 541 catcacacag ggaagcaagt cccaaagagg ggtgagacag cacaggaaaa tcctccagtc 601 caagacag //