LOCUS BG067959 727 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060B07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060B07 3', mRNA sequence. ACCESSION BG067959 VERSION BG067959.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 727) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067959.1. Other_ESTs: H3060B07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: B column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..727 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060B07-3" /db_xref="taxon:10090" /clone="H3060B07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 245 a 140 c 137 g 205 t ORIGIN 1 catgtaccca cctgtatctt tattagaaca aatagtaaca gattaatctt caagaagtta 61 caagtatcag caagaattcc tagaagacaa ctttctctgt aaaggactta aatgaactcc 121 tattaaatcc gagttagttg aaattatgtc ttctggacat aatctgggct aataggcagc 181 ccaacagagt cacatttgct acatccaaat gtttaaactg ttgtgggtcc taagtttatg 241 atctggagac ccagcattgc ctataccaga gagaactact ggaatattga ttgtggaaca 301 aaaaaatgaa agctgagtat tagagatgga caaaatcgaa agtcaatgtc cattgctgat 361 aggaacatgg atatgtcaag cacctaaaag cctgagacac attgtaaagg aaagatcttc 421 ctctgagcaa gagaatggat gttccatctg caaaaagtgt caagcattct tttcttcact 481 agtactattg tagtttgagc gtgtcataat aggggcacct ttccatgaga agattgtccc 541 cctttgttaa gtgcataata aatgttttga ctttgaaaaa aaaattgtgt gccaagtaaa 601 tactaccatg aaccagtttg atttaaaaac taactatggc aggtcaccct ggcagtagtc 661 tagccaggcc ctcctgcgat tttaaataca acttgctgta atcagacact cccagtaaca 721 cagccta //