LOCUS BG067946 659 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060A04 3', mRNA sequence. ACCESSION BG067946 VERSION BG067946.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 659) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067946.1. Other_ESTs: H3060A04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..659 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060A04-3" /db_xref="taxon:10090" /clone="H3060A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 197 a 145 c 140 g 177 t ORIGIN 1 aatgttttaa ttaattttta atgggaaaaa gtaatatcaa agaaatccat gtctacggca 61 tattaatgtg gttaatgcaa acaggacaga ttatcttggc caaattaaac cacagtaaca 121 cgttttgaac taaaagtcat ctatttatac gagatgaaat gtgaattagc gtgcgcgcgc 181 aggtgcacac atgcacacat acaaacagag tctttttatt cttaagccta ccaaataact 241 ctttaagcag taaataattt taagctctaa aatttaaaaa atagtgaacc ccttcaggct 301 atgacagaat gctgcttttg ccattctttc tgataaaagt cccaaagggt gtcataatct 361 gtatccttct tagaaaagta aggagcacat cctatgagct ggtgacctga gttttacacc 421 caagtcacac gtcagcacac agcaatgtcc tggaccattt gtgaggagcc ccacgctggt 481 cctgagcaac aactcacttg gactggtacg gggtgaggct ggcgatgggc ccactttgga 541 ctgtgtccac ctgaaggctg cagcaggcca gttccggcag gttttccaaa tggctttgag 601 gcaccataag ccttagctgc agtggaaccc attcccagac tcccattctg tggctgggg //