LOCUS BG067904 788 bp mRNA linear EST 12-MAY-2010 DEFINITION H3059E06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3059E06 3', mRNA sequence. ACCESSION BG067904 VERSION BG067904.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 788) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067904.1. Other_ESTs: H3059E06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3059 row: E column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..788 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3059E06-3" /db_xref="taxon:10090" /clone="H3059E06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 236 a 144 c 158 g 250 t ORIGIN 1 aacattctaa gagtacttta ttgacatcat tattaactat attgaatatg catttcaaag 61 agaatggact gtgcctctgg tgaaatagtg tgttcattat tacaacaaaa actgtgaaga 121 tcacatagtt aagtgaaaaa aaaatatgtc tcaaatacta caggttctta atgtgtatgt 181 acaacaggtg ttctataagt tttctattaa acaaagggga ctgaatgcta tgagtttgat 241 gagtttatga gacgggcatt ctttaaaaag agaaaactat tagcatcctg gaacaatttc 301 cattcctggt ccattttcgg cccactggaa aaaattacac tgcttttttt tctccaaagg 361 acatacaaaa aaattcttcc cattattagg tccaatcttc agcacagttt tcataatgga 421 gcgcttgcca tgtctgcaga acgggaagga caggtctgcc cattcaaaaa atccgcactg 481 tgctcctctc ggcagagaac aggcataaaa ctgcctcccc ttgttttctc catctttcct 541 cacaactcgg agaacacaac ggcggtggtg catcttgcac agagggctgc catcactttt 601 ggaatgatgg ccacgtgtcc tattggtttg gagttcactg ttagaaagtc cagagttgta 661 acttttaagt tctgttgcag aagtgtgagc tggtttgaat tttttatgtg ctgaactaaa 721 taatttagac tgggcacaaa ctgtaggtga tatgtttacc ttattggatg gttgagttat 781 atagttta //