LOCUS BG067895 632 bp mRNA linear EST 12-MAY-2010 DEFINITION H3059D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3059D09 3', mRNA sequence. ACCESSION BG067895 VERSION BG067895.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 632) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067895.1. Other_ESTs: H3059D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3059 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..632 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3059D09-3" /db_xref="taxon:10090" /clone="H3059D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 210 a 129 c 114 g 179 t ORIGIN 1 gcacaattaa aatgcatttt taataatggc atcagtattt agctacactt agctgtgtga 61 aatgttttaa gttaaaatat aaaagtcata gaaacacttg tgttcaattt ctgtgattgg 121 atcaagaact tcaaattcta aagcaaaatg ctatgtcttt cccccaaatt catctcttca 181 tctgcagaca ctgagtttga tttataaact ctatcgataa gaaatctgtg gagattgctt 241 ctctcatgta tcctctaaat acttttcaga atttcattgg caatactttt tactattggg 301 ccccttacag aaaaagccag gaagttccga gaaggcactc tccacggaaa tctatgtacc 361 aaacactgag aaactacaga gctgagtgag tcgaggctgc tgcagggaag gtgactccta 421 tgatccagag cagaggcctt aactacactc ttcctccatt taccctgagc atcaaggatg 481 caagcaccat ctgtatttcc aatagaaaac aagagaatgc aagtcaatgg atagagcgga 541 caaaacccca agtaattact gtgatgaaat aacaaacttg aaaatcatga gttcaaaggt 601 agaagagtcg gactatcatt tcccttggct cc //