LOCUS BG067860 700 bp mRNA linear EST 12-MAY-2010 DEFINITION H3059A05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3059A05 3', mRNA sequence. ACCESSION BG067860 VERSION BG067860.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 700) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067860.1. Other_ESTs: H3059A05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3059 row: A column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..700 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3059A05-3" /db_xref="taxon:10090" /clone="H3059A05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 120 c 130 g 218 t ORIGIN 1 gaagtatctg actatattag caccaaacta aatatcaaag atactgtaac acaaatttaa 61 aacacaaggc ttaatttttt tgtatcactg acttttaaag cttgattttt ataaaacatt 121 aaaataagag ttctttatta cagaaattaa acagcatcaa ctgctttgtg agctcaagat 181 atatacaaca aaatcaaata attagcatgt atttcaatat ggggtctata taaagagaaa 241 tgtgtcttac tgctgcattt cgtgggttct tcctgaactt accacagaat cagcaagagt 301 gctacacgtt attaagggag ccaacagatt cactgtggga tggattcctt taacaatggt 361 cactgtaggt agaaaaactt cttttaaaaa gctaaatact ttgtctaatg attttgctca 421 gaagaatctt gaccaagata taaagaagca tctaaatata aatacagcag aaggtataat 481 gtgatggggg atggtatgtg taccgtctct tcattgatgg ggttttgtag gccacaatac 541 tattcccttt gtggcttgtg gttgtaaatc agtgtagacg gatttcttca gaactggtaa 601 taaactgggg tcctgattct tccctcgttt caggcaccac caaatctttg tcagtgtaaa 661 tcagcagacc aaacgaaccg tctcgtcagt cattgacagg //