LOCUS BG067663 653 bp mRNA linear EST 12-MAY-2010 DEFINITION H3056H01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3056H01 3', mRNA sequence. ACCESSION BG067663 VERSION BG067663.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 653) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067663.1. Other_ESTs: H3056H01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3056 row: H column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..653 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3056H01-3" /db_xref="taxon:10090" /clone="H3056H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 155 c 188 g 138 t ORIGIN 1 aaagcagagt ttaacgttta ttttacacat gtccgcagac actcgtacaa gagtgagcac 61 ttctaaaact cccagtatgg ttttcatagt gcagaggcag gaagagtgtg atgtgcgtac 121 atgaccaggg actgtgggtg gagccctctg gccggcacgc actctgggga gggctgatta 181 ccagcactga gcagcaggta tggggtctca gcctccagag aggtcaaacg gtccatctcc 241 cacagcaggt gacagagagc tgggccagac ctgccaggct gtgggcccca cagacactga 301 acttggttac catgagcaaa aagctattct ggtttatttt aattgtgagc ccttagtgtg 361 cagtaaaagt tcactctaca ccagcgactc actagatggt gatctagaag tgctgactac 421 tgcccctcac gccagtgttt ggaatccgga agcagagctt tggagactga cgctgggtca 481 ggccctagct ggactcagtt gccagcgaga tcaggcaccg tggaatgttc actaggtctg 541 ttcctatccc tgggagctga agtacaaagc tacaggcaca aggtttgagg atagaggaag 601 gtagagagag ctgccaaaaa cagtaaccgg aaggccagag gccaaggcaa gtc //