LOCUS BG067649 704 bp mRNA linear EST 12-MAY-2010 DEFINITION H3056F10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3056F10 3', mRNA sequence. ACCESSION BG067649 VERSION BG067649.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 704) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067649.1. Other_ESTs: H3056F10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3056 row: F column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..704 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3056F10-3" /db_xref="taxon:10090" /clone="H3056F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 250 a 131 c 114 g 209 t ORIGIN 1 atagtacaca tttttactta ttaaagttta ttatcttcat aattacaaca gtaatttata 61 agtttgaaac atgagagaac atctatgaag agagcacaga taaagctgaa caagtacata 121 aaaggaagat ggttaaaact ctgtctttgt ttcaagcgca ggctttggag ccagggtcaa 181 caccataaaa catcacaaat ggctcttaag acattcattc tatacactca agcatggaga 241 tatagatatg tttatgtcat attacatact ttagtatgat attggcccac tgagcacaca 301 catcttaaca aaggataaga acctctatga cccagctaag cgcacagaag attagggcac 361 acttactaca catcaaaagt tgctgtttat aagttataga tatttaatat ttccagagtg 421 ttttttatta aaaaaaatta aagcatttca aacatttttc acttttctca gtgcaaacga 481 aggttattca agtcaactta cctttctcct gaggagtgag aggaaggggc aaacaggaac 541 accacccaac ctgacctgct catcaccctt tgcagcaagc acttaggcca cggaattagt 601 tatcacaatt aaagccttgt gattacgatt cagcccttac ttcatgtttt aacttttatg 661 ctgaaatatt tatttacaaa agtagaaaaa agttagcagt gcaa //