LOCUS BG067450 747 bp mRNA linear EST 12-MAY-2010
DEFINITION H3054E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3054E11 3', mRNA sequence.
ACCESSION BG067450
VERSION BG067450.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 747)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG067450.1.
Other_ESTs: H3054E11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3054 row: E column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..747
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3054E11-3"
/db_xref="taxon:10090"
/clone="H3054E11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 167 a 178 c 167 g 235 t
ORIGIN
1 gctgatttcc ttattcttct gatggttttg gacctcgggt ctaatgagaa ctctgtggtt
61 gggaatgtta ttggtttctt tggttgatgc actgtcagtt gtaatcttgt ccactctttt
121 cacaggttct gtctgcacca gagcagcatc taacatggcc ttcatccaca gctccatctc
181 ctttcctgta tcggtgcaga aataataggt ccgcatgttt gggtgggctg ccttaaaagc
241 atatttgcga ttgatgtggt cctcagcagt gagcatggct atctgaaaac taggcaacag
301 gatacttccc aaaataccct cctccttctc atctcggtaa tagaaaaggc aaaggtcaga
361 gagcacaaac cagcgcttct tccacagctt catgccggtg ctgtcctgct tatacagcca
421 gccacgccgg accacaggtg cattagggtt ccttttaatt gaattggacc ttttcccaaa
481 attatgaacc tttttggagg cccgcgaggt cctgcccaca gggctcatgg gatgcactgc
541 ataatctgaa gccatgttgt aattggaagc ttcatttatc atacttatgg gtcgttcctt
601 cttgtcttcg gacgtcatgg ttgcaacagt ctgatcattc acaacaaaga tacagttgtc
661 ttgggatggc tgtcctgtaa ccggatgctt gcaggtcact ttcctttcat tgtggtttat
721 atagtatctt gcaccttcga acgtata
//