LOCUS BG067404 729 bp mRNA linear EST 12-MAY-2010 DEFINITION H3054A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3054A10 3', mRNA sequence. ACCESSION BG067404 VERSION BG067404.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 729) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067404.1. Other_ESTs: H3054A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3054 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..729 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3054A10-3" /db_xref="taxon:10090" /clone="H3054A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 253 a 120 c 129 g 227 t ORIGIN 1 aatttccaaa actaaattca gctttaatta aattaaaatt cgagtcaaat gttgaaaatg 61 ctaacataat atacattttc ttaccataca aatatacaaa atgctttcct ttctctaatt 121 tgttactggt aaagcataaa tgaatactca actgatatac atctagaaac ctttctgata 181 ttacattaat tagttcaaca tatcagagga ctttacaaaa caggttagag aacaaaagta 241 agagacaaca ggagcttccg ttcttcccat actatctact aagaccacag tgtgcgcaac 301 agagtgtagg ttcattgtag tcgttccttg aatgaaagat tggagacaaa atcttccaca 361 gacacaggtt ttggcagtat ccaaatcttg acaaagatgg taaggaatta tatcagggcc 421 atatggaatc ctatagaata gcacagcttg ttcacatgat tccagtaaag ttaatggtac 481 ttgaagcttt ataattggaa tgacttctgg tttttcaaaa gtattcccaa aaagatccaa 541 gtactccagg gataacattt taaattcaga gggtagattt ctaagtttgt ttcgagctgc 601 tgatagaaaa cggaggtttg ttagctgtcc tatcttgaaa ggaaggtgaa tcaattcatt 661 atcattaagg tttaagttag taagttcccg gaattgacaa aactgcacag ggagcgcttt 721 gattttgtt //