LOCUS BG067324 742 bp mRNA linear EST 12-MAY-2010 DEFINITION H3053B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3053B05 3', mRNA sequence. ACCESSION BG067324 VERSION BG067324.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 742) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067324.1. Other_ESTs: H3053B05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3053 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..742 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3053B05-3" /db_xref="taxon:10090" /clone="H3053B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 233 a 134 c 132 g 243 t ORIGIN 1 tttgtttttc ttttgtctgt agaatggttg aatgatttta cggctctaag gtaagcacac 61 acaatgtttc ctgggcttct ttagccacct tcagttagct atcaagtcac ttgtgatagt 121 gtggtccact acagattctg ctagaacaac atttctcttc tgatttcctt cagtagagta 181 tcacaggtat actttcattg gagcatgagg gatgaaaaag aaataacaga agtgcatgag 241 tatttttgtc aaaatttgtc taacttcaac ttttttgtgt ttgattgaaa caaatctaga 301 tattagtagg atataatata cctatatact taggaccaca gttagagtgg taaattacta 361 ccaagcgtca tgcacacatc tactatgaca actctcgtct atgaattcaa cactatgata 421 gcttgctttc tgggcacaat tgataacttg atgttacctg taaaatgttt taactctcat 481 ctagggcact ttcaaatctc ttcaaatcat ggcatgctgt gtgtatatag tctagtgtat 541 tgtgaccaat atcagatcca tagagggttc ctcttgattc agaaagttat agagcaaagg 601 gaaagccact taccacaaac atgcctacat tataaagaaa gaatgggaac agcaacacct 661 aaatgaatat ttctactagt agtttggaag actaaaagtt aatagcattc aatagcctaa 721 agtgacttaa cactccttgc tg //