LOCUS BG067263 614 bp mRNA linear EST 12-MAY-2010 DEFINITION H3052D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3052D05 3', mRNA sequence. ACCESSION BG067263 VERSION BG067263.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 614) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067263.1. Other_ESTs: H3052D05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3052 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..614 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3052D05-3" /db_xref="taxon:10090" /clone="H3052D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 150 a 171 c 128 g 165 t ORIGIN 1 acgtaagatc agaaacattg ctctggctca cttctatgaa ttcatccaac ccaaattatt 61 atagtgatac aaccaaaggt cttgtctttg ctcctcagtg acctcttcca ctgggcattt 121 acaagccctc tgttgcctga aagagaatgt aaagccttcc tgacccttcc acatactcat 181 aagagtacta ccttctgagg ctacaccctc aggtctgcca cgaggtgggt ggggtgaagt 241 gtctctccac attccaactg ctgtggtttg agatgggacc cgaggaacat ggtctacaga 301 ctccagtcac ctcctcgttg gtcagtccct caaaggtgac aatcagtgtg cgcagctccc 361 cctcctcagt tttgcagttc ttcaaggtat gtaagccatg cctcagaagt cacccatggg 421 atgcacacag ataaaccacc aaagcaggat acaggttttc tttggttcca gaacacaggg 481 gcagcatctt tcaggagcag ccctccagtg ttgctcaagt tgttctccta agtcacaaag 541 ggttgttcag ggtcctctgc caacttaatc cctaaaggtt tcacagacac tcccagtctt 601 atcctctctt ttgg //