LOCUS BG067127 854 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050H06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050H06 3', mRNA sequence. ACCESSION BG067127 VERSION BG067127.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 854) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067127.1. Other_ESTs: H3050H06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: H column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..854 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050H06-3" /db_xref="taxon:10090" /clone="H3050H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 227 a 231 c 197 g 199 t ORIGIN 1 aaacaactta aatttttata aaaagacaaa tatacatatt tacacaggtc caccacatga 61 ccaaacacca tttagcagtt aggtggcgtt tctaatagat agtcaagagt cacgccaagg 121 cgctcacaac cccccttttc cctgggcctg ctgaggactg ccaaggcctg aggagacagc 181 aggcaccagg caaggcacta tataaataaa tgcaaaggcc tagactgggg agaaatgtta 241 gtgtacacct ctgatcagaa atgtggcaaa gtccacagag aaagtgccat ttttttttcc 301 tgagccccac agctggagca ggtagtgagg cagattccct ctgaggctaa gggagccaac 361 cttcacagga ccccattttt tttcccttca catttcactg gcttgggaac catcccaggg 421 ctcggttggg aagggcagca gttctttggg aataggactc atttagtgca attgtctcct 481 agtacagagc cagctctagg gccagtgcta tgctcttctg tgggcgctgg tctattcccc 541 tcagggccag cccagcgata agaccctctc tatgcaacaa ggcttttaaa aagctagaag 601 atgactcctg tccatggcct ctgccttaca cctcagaccc cccaatccat cttcctagga 661 gtcagggcca gcttcacctc acaagaaaac tcagactctg cctcctaagc cctgagagcc 721 cactgaccca aggaggatgg tcccctgttt gcagtgggac tatgctttgc catgtgtcaa 781 ggggccacag gagtctagct ttttttgtat caagccacca tgatgccaag gctaactcac 841 tcaggagggc aaga //