LOCUS BG067120 789 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050G11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050G11 3', mRNA sequence. ACCESSION BG067120 VERSION BG067120.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 789) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067120.1. Other_ESTs: H3050G11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: G column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..789 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050G11-3" /db_xref="taxon:10090" /clone="H3050G11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 163 c 158 g 254 t ORIGIN 1 attttttaaa tactgtctgg gttactgata gagttgaaga gtcctaaagg catacaacag 61 catattccag gtgagcataa gaaataaaaa catgcattaa taatacatgc attaataatt 121 gggaggatcc taaactctaa tttggatatt ttcttgtctt gtcttttctt ttggtttttc 181 aagacagggt ttcgtctagg tagctctggc tgtccaggaa tccactctgt agaccaggct 241 ggcctgtaat tcagacatct gcctgcctct gtctcccaag tgctggaaca aaaggcatgc 301 gccaccctcc accagatctg gatcagatat tttcagtcat agattctcaa ggtatttttt 361 actctccaga gaataatttg aattttcttc ttacatttat tgattgttta tatgttgcac 421 tgagatgcca tggcacccag gaagacaatt ggtcaggaat ctgtcctcca tttacaccat 481 gtggattcct agcatcaagc tcaggttgtc aggtttggtg gcaagtaact ttacaagccg 541 agtcatctcg ctggccccaa agactaatag ggtttttttt agtatgtcta atcacagatc 601 tttaaaacta tctgtaaatt tctttgtcta ctgcccaaat gtatgcaaat taccatcaaa 661 ttggtttccc tagtagtaga ttagtttgga gggaactgtc tggctcacct gagtgattca 721 aaccccagtg agcaaacact tccaagcttg ctggcagaat ttgcctgaga gagaagctgt 781 tccgttacg //