LOCUS BG067039 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049H05 3', mRNA sequence. ACCESSION BG067039 VERSION BG067039.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067039.1. Other_ESTs: H3049H05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: H column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049H05-3" /db_xref="taxon:10090" /clone="H3049H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 255 a 151 c 124 g 203 t ORIGIN 1 gcattttaaa atggctaact ttattgaaag ataggcacaa agtggattta acctgcttaa 61 ctttatttga tctaactctc ttgattacag aataggatca caatcactac aagaccatgt 121 acattaagcc aaaagtaatt cttcttgaac aatctgccag tcccatctag ccatcttatt 181 aaacacatgc catcgatcgc aaaggaggcc agaaggattt gaaaacgtct tgtcacccac 241 ccttaccacc agaagaaaat gtatttccaa cccttgtcct actgtcaatg ggtggcacat 301 gagagaagaa tttctgaaga ttgtggcagg cagaaatcag tgacaatgaa cccacagtga 361 atagttccct ttgaaaatat tttctgtaag aaggaacata tcttaagtaa cataatccat 421 gtatgaatga ggatgtaaga taacagactg tatggctaac agacatgagc atttattcaa 481 gttagcacat acatctatac tttaagctgc cacattattt agattcttca ttttaaaaac 541 tagctgggaa atcagtttgt tagacccact caacagtgca aaagtaaaaa gagaacatct 601 tgctatgttt cctgccatgg atgatggcag atgtttcaag tttctactgc cccgtcaccc 661 tgcagctcaa aagcaacact gaaattaaaa ccttcattaa gacaacagtc acaatacatg 721 actttcaaag gaa //