LOCUS BG067017 821 bp mRNA linear EST 12-MAY-2010
DEFINITION H3049F05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3049F05 3', mRNA sequence.
ACCESSION BG067017
VERSION BG067017.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 821)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG067017.1.
Other_ESTs: H3049F05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3049 row: F column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..821
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3049F05-3"
/db_xref="taxon:10090"
/clone="H3049F05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 215 a 214 c 200 g 192 t
ORIGIN
1 cttcaaaata ttttattata aaacacaaca cagggctcac caacagttcc cacccaacac
61 tgtcaaatac acactgctgg acacagtgcc cccaagatct gactccagtt gagaatctca
121 gtttcaggaa aaccgcagca gggagctgaa tggagagacg gcaagtcgcc aggatgctgt
181 gctgatgctc aacaagaaca gtccctccag gagtggacac ccatggccag ggctgtgggc
241 caccgagggc ttgagcccaa gtttgggcag agaggagatg aaactccaac agtcccagct
301 tcaggccact atttcttatt ccttggcttt agctcttcag ctgcattacg caagaaaatg
361 taatttttct tttggggatt ataaaactca tgtcccttgg accagtcgta gctggaagca
421 taggcaaata tgtttccatt gtgattgaag cagcaagctg cgatgggctg atctaactgt
481 tccgaagtct ttagtttggt cctggcatct ttgtcccaga agctgaacct accatcggag
541 cccacagtgg caagggtacc atggacagga tggaaggcaa tcccattcac ctggtgcttc
601 aggggagact cgattctcct gaactcagag ggctggttct ccagctgata gacaatcagg
661 cccctctctg cagtggctac cacagccatc gggtatatca catctgcaca gtaacagcgt
721 tcagggagtt gcaagaccat cataggattt gaggaccgcg tatcccagaa cttcagagtc
781 ttatcccagc tcccggtcat cacacagctg tagtttgggg c
//