LOCUS BG067010 717 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049E10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049E10 3', mRNA sequence. ACCESSION BG067010 VERSION BG067010.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 717) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067010.1. Other_ESTs: H3049E10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: E column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..717 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049E10-3" /db_xref="taxon:10090" /clone="H3049E10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 140 c 132 g 211 t ORIGIN 1 attttctaag atttattttg ttcacctgca aactgtagca aaacatgatc agctttattc 61 cgcagacagg tgtcctccac atctttaaag aacttagccg tgtatgaata gaagagctct 121 tgagaaggaa aaattcaaga atgaataaaa ccttccaatt tgaatttccc agaagcaatg 181 cttcaaatga ttttaatcat tcattccaag ctatatgaca gcaccttaaa agtggctcat 241 ctatttcccc agtaacattt ctcacataac aatgtgttaa agttacaaat actgatatgc 301 acaaatagct aatttctaag aaaaatatgt acagtactgc agcataatga atgtgggatc 361 tgcaataact taacattagc caatttttaa cttacatgat gccgctacct tttcctgcca 421 attcacaagt gaaaagttgt tgctgagccc tctgttttgc acatattacc tggtgtttaa 481 tacacagtgc aggcatttta aggacttctt tcatgtttaa agctaagatc agtgaaacaa 541 gacaacagtg caagaggcga agagatgtaa tatggtcaca taaacgttcg ttccggtaca 601 gagtctaagt aaggctataa gaaagggttg gtggatgagc ttcctgttgg aagttgtcct 661 gtcggcgcac cagtcataaa aggattacta gacactccag cagctgctac ttgaccg //