LOCUS BG067007 698 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049E07 3', mRNA sequence. ACCESSION BG067007 VERSION BG067007.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 698) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067007.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..698 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049E07-3" /db_xref="taxon:10090" /clone="H3049E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 173 c 156 g 191 t ORIGIN 1 gtagcaaaac atgcagcctc gatttttgct gcatggtcaa aaagtcccat gtggcgaaca 61 tcatcacagc actaagcagg agggccgtgg ggttggccat gtccttgcct gcaatgtccg 121 gggctgttcc atgaaccgat tcaaagatgg caacaccgtt ggctccaata ttgccacttg 181 gagtcacccc aagacctcca atcagtcctg cacacagatc actaaggatg tctccgtata 241 aatttggcat gacaagaaca tcaaactggg atgggtcttg taccatattt aaacatacag 301 tatcaaggta catctcgtta aatttaatgt ctttacagtt ctccgcaact tccctgcatt 361 tttgcagaaa gagcccatct gacatcctca tgatgttagc tttgtgcaca gctgtgacgt 421 tgctccggtg gttgttccga gcgtactcga aggcaaactc tgcaatgcgc ttgcttgctt 481 cttcggtgat gagcttgatg ctctgcacaa ccccatcaac gatcacatgc tcaattccac 541 tgtattctcc ttccgtgttc tctcggatgg tgacgatatt tacatccgtg taaggggttt 601 tataaccttc aattgagaca catggccgga cattggcata aaggtcaaat gtcttacgaa 661 gcaacagatt catagatgga tggccagcga ctattggg //