LOCUS BG066988 663 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049C11 3', mRNA sequence. ACCESSION BG066988 VERSION BG066988.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 663) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066988.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: C column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..663 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049C11-3" /db_xref="taxon:10090" /clone="H3049C11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 176 a 159 c 128 g 200 t ORIGIN 1 gtttgtttgt tttgaggcag ggtctctata gtcctggctg gcctctaact cagacactct 61 cctgtctctg tatcccaagt gctgggatta aaggcgtgca cccccatgcc tagctggttt 121 ggcttcattc tgacatttgt ttcaatagta tctacatgat taacaggtaa tcagattttc 181 ctccagcccc aaccaagagt aatattccat atagttgtct cagtctggac aataaatttg 241 ttaccaaatt taatacaatt acacacagta ggaatttgcc tctaccaaga gtgataaaaa 301 tatttcattt ctaaaaacag agctttgaag agtgaaacta ctgcacagac ctcctatgca 361 ggacacagcc aagtggtggg agcatttctc aaaacataag tgccagacgg ataacagact 421 ggactggaga tgtaagtgct cttcatgtgt cttccactaa cccgaagcct ttggtttatt 481 cctcgtagca aaccactcgt cacttttgtc tgcttccatt gcatcatcca ataatttgct 541 tccttttgga tccatcttgg agagttctcg aaaagcttca tccccaacaa agcaaatttc 601 atgtccatca gggtcagcca ggatgaccac ttgcactgtg gcttttcctg gggtgtccag 661 act //