LOCUS BG066987 646 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049C09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049C09 3', mRNA sequence. ACCESSION BG066987 VERSION BG066987.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 646) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066987.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: C column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..646 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049C09-3" /db_xref="taxon:10090" /clone="H3049C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 127 c 130 g 203 t ORIGIN 1 gtctttgttt ggatgtttgt tttgttctgt ttattttgtt accaagttct agcccactga 61 ctcattcact caaccattca gtggccattg aggatagtac gttgaacact gtctagacac 121 caaatggtta gtaaagcatt cccttctctc acaaaacttg cagtctcagt ggtaagccaa 181 taacgaatat gcatcaatct atttcaatgg aggttttatt tttctccaat tattgtgaaa 241 aaatattgat cgtgaggctg acagatggtt cagaaaatta gaggtggggg tgggctgata 301 atatgagttc tatccataga tcctaccagg tggcatgaga gtaccctgac ctcttcacat 361 gtactataac atgtatgcac ttgtacacac agagagctac atatgcatgt gtgcttacat 421 acactcatgc acacactaaa taaaatcaat cattaaatac aatttttaaa atattgattg 481 tgcataggca ttcccttgcc ctttctttag tgctgtatct acactatgtg tgtggttggg 541 acactgtgga aaagtgtccc atgtgactaa agcatggcgg acatagcatg ccatagcaga 601 catccatgcg gaaaggcata gcagatcttc ctatgaagag tttcag //