LOCUS BG066934 686 bp mRNA linear EST 12-MAY-2010 DEFINITION H3048F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3048F11 3', mRNA sequence. ACCESSION BG066934 VERSION BG066934.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 686) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066934.1. Other_ESTs: H3048F11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3048 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..686 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3048F11-3" /db_xref="taxon:10090" /clone="H3048F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 141 a 176 c 182 g 187 t ORIGIN 1 agattatggc ctgcagccag aagagggcac cagatctcat tatagatggt tgtgagccac 61 tataaggttg ctgggaatta aactcaggac ctctggaaga gcagacagtg ctcttaacct 121 ctgagccatc tctccagctc caatgagtga ttttcattgt cccaaggcaa agcatttctg 181 aaggcggatc atgatcacat tgttttttaa cagagacttt gttgcccaga atatccttgg 241 gtttacgagg ccctgtggct tcatttttac ccgagttctc cacgtctgcc cgctttctca 301 tgcgtagagt gtgccaagag catgacttct tgatgctccc gtcactactt tcggccgctg 361 ctgtggcttt ggcgaggggc gccaggatgc tgcctgggac ccagccctct gctgccgggg 421 aatggtcgct ggcaggctgg tacaccagac acatgttctg ctggttgacg gcgaggacct 481 gtaccacctc accttggctc acgcagattt cattctcctt cagtgcatag taatctttga 541 ttacagtcat ggttgatgtc ccattgcagc ctcccaggtc gttcttgcta gcgtcaaact 601 tgtccccagg ctgatggtag tcgaaccctg gactgccatt agaggtagat atcttcaggg 661 gtggcagagg cgggttatag ctggag //