LOCUS BG066910 744 bp mRNA linear EST 12-MAY-2010 DEFINITION H3048D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3048D10 3', mRNA sequence. ACCESSION BG066910 VERSION BG066910.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 744) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066910.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3048 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..744 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3048D10-3" /db_xref="taxon:10090" /clone="H3048D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 227 a 152 c 140 g 225 t ORIGIN 1 gagtagcatt attactttgg gggctcttgc cttcccccac acataaaaag aacatatttt 61 tactgtttca aaattactac agagtattga gagttggaga aggatgacat taaactactc 121 tatgctttga tctagggccc aggcaatgcc aatgtgtttg ttagttagtt agttactttg 181 tttgtttgtc tgatactggt acacagaagt aacaggaata ttttctcatg tctctttaaa 241 tggtaggatg agaaataagc attggtttga aacttactcc agtgtctgag ccctgggtct 301 cagaatcaac agtgctaaca tgaacctgaa gaatgtaaca cctcctttgg ctgtgacatc 361 cacagtgatt caactctagt acttcagagc taaataaacc aaaacccctt tcaggatttg 421 aaatgataaa attccaggtt ctgagctctg tttcaagcta gaggccagac tttcaagatg 481 accctcagga aatgttaatg aatccatatt cagaaataga tattgcatgt ggctcaacat 541 taattgtttt aattacgtca agtcatttcc gaatgacaca gacacaaacg ccatttcctg 601 gacattatgg acatgtgaag tcacactgtt gcttaccagc ccccactatg cccagagcta 661 aaagcatgcc cacaacagag ctaagcaaat ctcatgcctg gtttatataa acaagcccca 721 tgggttttgt ttgtttttta aaca //