LOCUS BG066840 782 bp mRNA linear EST 12-MAY-2010 DEFINITION H3047E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3047E11 3', mRNA sequence. ACCESSION BG066840 VERSION BG066840.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 782) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066840.1. Other_ESTs: H3047E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3047 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..782 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3047E11-3" /db_xref="taxon:10090" /clone="H3047E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 170 c 156 g 216 t ORIGIN 1 acattaaaaa tttttatttc atttaaaaga tccaatattt gaagccaaat taaccccaaa 61 tttacagcta catttagaga tctctgaact aaatggcact gtttgaggtc acctgtcatc 121 gttatctccc ccaaagttgt ttctgagcaa aagctggtat ttctgtaaca catatcttag 181 atgtcacctt tctcacagaa attaaaggcc gacagacttt ccccttgtgg gcgaggataa 241 atacacaacc gacccaccag gaccaatgct ttgtgcacac tataggtgta tgtaactata 301 aagtaacgta tggcgctatg ctgtgctcct gtatttattc caaatactgg tgttagtcaa 361 cactttctgg gatagtactt caaaatttcc ctcttccagt gcacaccaaa ggaagtgggt 421 tgctcaagct agagacaaac taccacaaag gaacagcttt tctagtcggc tggtaacaca 481 caaaccacct cccgagtgtt ttacttaaag tgatgcagga tcttggtctc tacatacata 541 tgaggataaa ttaaaagatg agtttgttac tttatagcta cacatttgac ttcaatagat 601 gtgcagacaa tgtgtctaat gagtccatct ggaaatcact tcagcctgtg aaagagaaga 661 catggcagag ggtggaaagt catccttcca gcattccctt ggaggacaga gctgggccca 721 aggacagaag ttaccaggag ggaggcttca gctccattaa ggagacttcc taacagagct 781 gc //