LOCUS BG066791 703 bp mRNA linear EST 26-JAN-2001 DEFINITION H3047A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3047A03 3', mRNA sequence. ACCESSION BG066791 VERSION BG066791.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 703) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3047A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3047 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..703 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3047A03-3" /db_xref="taxon:10090" /clone="H3047A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 177 c 110 g 228 t ORIGIN 1 gggtttataa tataaataca tttctccctt ctctgtcctc tctccaaacc tcccaatata 61 tcctttccta ctctctttca aattcataac ttcttaactg ttatcgcaag catacatgtt 121 tatgtatata aaaatatatt cttaagtata acctgcacag tctgttaatg tttcttgcat 181 gtatgttttc agggcggacc atttggcact ctacaacaaa ttggtgtagt cttccctggg 241 aagatcacct cttatgctcc aatgtttcct ccgttgcctt ttgtcctgtg tgagaagccc 301 acaccaataa agtctcacca atatgactgc ccaaaagtga gccaaacaag aacagcacta 361 ttggatatgc caaagcagtc agagaagagg tcacggtgcc tcaaccctgc ataaagtcca 421 ttactttgag tttagcctca ttcagcttct cagaacacag ccagattctt tgccagaatt 481 taataggata taatggccct accgtctatt cccattttcc tgtagaatct ttttccctct 541 gtagcctctt gagatagacc ttcactgtct gcatttctct agggactctg ttcctctaaa 601 accctaccag aatcacccat gaagttatac ttacagtgtt ccagagcttt gctggcccac 661 atttctaagt tttcgacatt catgttgaag atcaagtagt cag //