LOCUS BG066752 639 bp mRNA linear EST 12-MAY-2010 DEFINITION H3046E06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3046E06 3', mRNA sequence. ACCESSION BG066752 VERSION BG066752.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 639) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066752.1. Other_ESTs: H3046E06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3046 row: E column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..639 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3046E06-3" /db_xref="taxon:10090" /clone="H3046E06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 142 c 155 g 169 t ORIGIN 1 agatttattt attatcatta agcacactgt agctgtcttc agacacacca gaagagggca 61 tcaaatatca ttacggatgg ttgtgagcca ccatgtgttt gctggaattt gaactcggga 121 ccttcagaag agcagtcagt gctcttaacc actgagccat ctctccatcc cctctttttc 181 ttttttcttt tctttttttt ttctttttga gaaaggttct tattctgtag cccaggctgg 241 cctcaaactc acaataacct tcttgtctca gctttccaaa tgggattaaa aatatgagct 301 accaaacccc caaaaaggca agagcctcct acggaataga aatcctaacc cattcaccac 361 tttggagcgt aactgaggca cctgagtcag agggacagta ggacagaaag actttagacc 421 cccttctccc ccagggttag gcgagtggag aaagattaat ctgcagggga agaataactt 481 taccgggagg agcacttgtc tgggaggagc acctgcaaag gaagacagtg caggggaggg 541 aggactgcta gggtcagcac acagagcagt atctgcagag cttgagtgtc catagagagc 601 aaaggtgtgt tgggttggtg tctggacatc aggtgcttt //