LOCUS BG066708 741 bp mRNA linear EST 12-MAY-2010 DEFINITION H3046A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3046A10 3', mRNA sequence. ACCESSION BG066708 VERSION BG066708.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 741) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066708.1. Other_ESTs: H3046A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3046 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..741 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3046A10-3" /db_xref="taxon:10090" /clone="H3046A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 167 c 164 g 222 t ORIGIN 1 gtttgtttgt ttgttttggt ttttcgagac agggtttctc tgtatagccc tggctgtcct 61 ggaactcact ctgtagacca ggctggcctc gaactcagaa atctgcctgc ctctgcctcc 121 cgagtgctgg gattaaaggc gtgcgcgtgc gcaccacgcc cggcttgttt ttgttttttg 181 agacaaggtc tcatttatga aacctgggct agtcttaaac ttgtagtcct cctgcctcag 241 tcttctaagt actaagattg caggtgcgtg ccaaccacag ctgacagagc gcatgtcctg 301 agtgcccatt caagtagtgc agtggagtca tcagtatagg ttttttatag gccttagctt 361 gaagttctct ttttcatttg tgggcaaagt actttagtta cccagcccac acccaaaata 421 ataaatgtgt aggtagtgat tcatccgaga gttccagttt atatcgttca cttgcagtga 481 cctcgagggc atcagtaaat aagttgtgtg cagcacttca cagaaagagg agccgcaatg 541 gtccgactcc atcgttggtg tgagtggggt aattgcccct tttcttttgt ttagtggttc 601 cccccacccc aaaatacaaa tagaagctct tcttagaaaa acagcaaaac agaaagaaga 661 gggagttaaa acaaatcaca gaattgttca tctataagaa aacttcaacc tctgcaaaca 721 ttttaatata tctctattgc a //