LOCUS BG066688 587 bp mRNA linear EST 12-MAY-2010 DEFINITION H3044H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3044H10 3', mRNA sequence. ACCESSION BG066688 VERSION BG066688.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 587) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066688.1. Other_ESTs: H3044H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3044 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..587 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3044H10-3" /db_xref="taxon:10090" /clone="H3044H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 152 a 137 c 136 g 162 t ORIGIN 1 aatggaatat gtgactttaa gaatatattt gagggccagg catggtggtg cacacattta 61 atctctgtcc tctcaggagg cagaggaagg taaatctctg tgagttcaag gccagcccag 121 tctatgcagt gagttatagg atagccagga ccatgtagag tgaccttgcc tttaaaagaa 181 tcatctgaag cattgataag ctcaactgtt atgtcaaatg caccttctgg caaagtccac 241 agcaagaaca gaggcttcga ggacccagtg ggtggaatcc ttgagagtta gatggtgcca 301 gactcagatc tcagctctaa aaattacctt tgtgcatctt gggtaagtta ctaattctcc 361 cttggcacgt gacctttctg cctacacaac acaagtcaga gccattccat aggctgtgag 421 tattaaatga tacctaaagg ttttattgtg accctgtctc gtgacataca gtgcctggca 481 cacagaaggc cgtgaatatg gggccactaa ctctgctcct gctgttgccg ggagtgggaa 541 ttattagctc atggtcattc tccctttctt cttcctccct cccccct //