LOCUS BG066648 767 bp mRNA linear EST 12-MAY-2010 DEFINITION H3044E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3044E04 3', mRNA sequence. ACCESSION BG066648 VERSION BG066648.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 767) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066648.1. Other_ESTs: H3044E04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3044 row: E column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..767 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3044E04-3" /db_xref="taxon:10090" /clone="H3044E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 208 a 162 c 149 g 248 t ORIGIN 1 gttttttcaa tctgtttatt gtgtacgcaa cccaaacttc agtttaagtg ctgtttaatg 61 tttatttact agattccata accctacaat cggtaaatct tataccattt taggcattta 121 atgaaatatt tagaaatact aagaaaagaa aaaaaaatca gtattcaaag ggttaatttt 181 gtttataata acaataaatt attttgtcat cttcttcagt tcaaaatcca gctttgaacc 241 cgaggaaggc ttttcagatc ctgttacgtg gtcttccttt aaccagtcgc agtctgatta 301 ccaatcacac ggagtatctc tttgtgaata cctccttctt gtgtgttgat attggcatct 361 cccacctggc catcttcata aacaaaaaag aatcttgtac agacatgatc cgtgttcggg 421 acaacccata tctcgccatg tttgtgcagg tcaggtgacg tgatcacttc acataaggct 481 atgcatttca agttacggct ttgcaggaac tgggattgct gtcctttttt ctgagactgt 541 gatgcattgc tgcttttact actggaagct ggctcgtcct tgcttgacac cttctgcttc 601 ttgttcatcc ctgagtaacc aaatgatatg ctggacatcg ggctaagata gatcccactt 661 ccgtacattg caccgtggag ctgcagacgc gtgttagagg caacgaccag accattcctc 721 aggatagagt gccagttttc aatgtgagag catgaaatgc gaaggtg //