LOCUS BG066356 523 bp mRNA linear EST 12-MAY-2010 DEFINITION H3042A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3042A08 3', mRNA sequence. ACCESSION BG066356 VERSION BG066356.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 523) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066356.1. Other_ESTs: H3042A08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3042 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..523 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3042A08-3" /db_xref="taxon:10090" /clone="H3042A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 156 a 97 c 99 g 171 t ORIGIN 1 acactttgct ttttaaatac atctcatgtg aacactaatt catacattcc atagaataca 61 tatggaagtc agatgtcaat ttgctggttg ccagactgag ttatctactg ctatgttcat 121 ctataggatc aaactcaggt tgctaagact tgtaggcagg gtttctcaac ttcaagaact 181 gcgtaagtag attagtgaga ctttaaaaaa cacacacaca cacacacaca cacacgaaaa 241 taaaagaact agggatataa ttcaacagta gaacacttgg catgtatttt ctaggccctg 301 ggttccaatt ctagtaggga ggaaaaaaat ttgcctattt ccctgctata ttttacattt 361 tttttgtttt gcttcttagg ctgtcttata gagtctagga aggtcctgaa ctatgtagat 421 tgatgactga actctttatt ttttgagaca aggtgtctct gtgtagttct ggtgatccca 481 gatcttactc tgtagacagg gatggcctta aactcagatt tgc //