LOCUS BG066321 604 bp mRNA linear EST 12-MAY-2010 DEFINITION H3041E12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3041E12 3', mRNA sequence. ACCESSION BG066321 VERSION BG066321.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 604) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066321.1. Other_ESTs: H3041E12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3041 row: E column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..604 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3041E12-3" /db_xref="taxon:10090" /clone="H3041E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 130 c 131 g 164 t ORIGIN 1 aggtatacca atctttattt cctcttaaat tagagaagag tgaatgttcc gtgctaatcc 61 agcagtggct ggctcgggtt ggctttccct ctgcctcagc gctggaggta gacgttaact 121 ggaacaagcc ctttcctgtt ctgaaacata agccctccga cagtaaaagg aaggtgttga 181 ggtttttttt taatactcaa atgtaacata agaaaatgct gaagtatatt tcctggaagc 241 ctccctttat tactaagacc acagtgtgta ttttgcatgt tttgggcttc tggaagcaaa 301 tgagaaagca tgaaatgttt gtatggaaca aagacactat tcggattcta ttagccaaca 361 gggaagttgc aaacaactca gaagcactta gcaatgctgc tcagccacag cattgctaca 421 aaagcacact tctataacag gcatctgctt gattctttaa ttagcagcgc tcacatggac 481 agtgaatcat cccaggtgct caagcctgca gaaggaagag gtctcatcaa cagaagtgaa 541 aagttgcact ttggaagata ccacatagag agaccctgaa cctggtccct cctctggcta 601 agtt //