LOCUS BG066123 717 bp mRNA linear EST 26-JAN-2001 DEFINITION H3039B12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3039B12 3', mRNA sequence. ACCESSION BG066123 VERSION BG066123.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 717) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3039B12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3039 row: B column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..717 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3039B12-3" /db_xref="taxon:10090" /clone="H3039B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 176 a 174 c 177 g 190 t ORIGIN 1 taatcccagg tgcgggctat ggagttgctt caggttgtcc acagccgcta actttgattg 61 tctcatgctc tagaaggggc gtgatttttg ccagctgcag atagtttatg tttggcattc 121 tggggtctct tgagagggta taaatttgag agccaaggag ggcctgtggt ggctgctgct 181 acccctgctt tccccagttc cgcccccccc cacacacaca cactgtccct gttgcttgtc 241 cctgctactg ctggttcctg ctgctgcagt tgttattgct ggattgttgg actgctggct 301 ggagatatat cctgacaaca gagattggac ttgccccaag gaacctgatg ctccctataa 361 gcaggaagta gtctaaagag gtttacaccc ctttttgctt ctaatctcct ttctctccta 421 cctagtatta gggacttaaa aggaactggg gtggaataac agttggaagg gtggtagata 481 acagagccca ataaaatagc cccccaaaag tatgcctatg aagagccagg tatggtggca 541 catgccttta atcccagcac accaggggca gaggcaggct tatctcttga gttccaggcc 601 agcccctagt tgctgtggac tccagaccag ccatggctac ataacaaatg ctatctcaaa 661 aagaaaaaaa tagtccacag caactatatt cttgaagcaa gtatgagtaa agggtgt //