LOCUS BG065713 711 bp mRNA linear EST 12-MAY-2010 DEFINITION H3034D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3034D05 3', mRNA sequence. ACCESSION BG065713 VERSION BG065713.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 711) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065713.1. Other_ESTs: H3034D05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3034 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..711 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3034D05-3" /db_xref="taxon:10090" /clone="H3034D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 230 a 136 c 123 g 222 t ORIGIN 1 atcggggaat tgagtccatt gatgttaaga gatattaagg caaagtgatt gttgcttcct 61 gacccatccc accatcctca ttctttttaa cctcttaatt gaaataacaa gaaatgtgcc 121 cccacaggtt acactgacac cattaacctc attatccagt attatgtttg ctagaatggt 181 cttgtgataa ctgaaaattc ccacactcta tcctgaaaaa taccttcaag tgtgggtgct 241 tatacatttt ttaaaagaaa cataccaaga caatatgcca tgcttgttta tgcccatctg 301 gtttttctcc agtctaagtt caatcagtca agactcaaaa tgataaaaag gctttctcat 361 agtttcatca tagagggagt ttctatcata aacaaatcat tttatgatga aggaaagttc 421 gagtagagag tcttcccata ttgatggtat ccacaaggta tagaaagttg ttgatgctaa 481 gacaaaatat cagacaagga caattataaa aatgcttatt ttatcttggt tttaagaaga 541 ccagttcatt gtaatgggga aggattaacg acaaatgctg gagatctgac agttttgtcc 601 tttcttgagt tttattcagt ctagacccca attctgagat ggcacaatga aatacaaagc 661 aggtctttcc tcatcagcta aatatcccta gataagcctc agagactatc c //