LOCUS BG065684 872 bp mRNA linear EST 26-JAN-2001 DEFINITION H3034A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3034A08 3', mRNA sequence. ACCESSION BG065684 VERSION BG065684.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 872) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3034A08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3034 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..872 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3034A08-3" /db_xref="taxon:10090" /clone="H3034A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 237 a 195 c 211 g 229 t ORIGIN 1 gcttgtttgt tagtttttat aatttatggt ttttattttt gtggtgctgg gaactgaacc 61 cagatcttgc ccatgctaaa tgctatacca ctaagcttat acttgccttt gtaaggacag 121 tgctctctca ggcctggcct tgaactcaga aatccgcctg cctctgcctt ccaagtgctg 181 ggactaaagg catgcgccaa cactgcttgg cctcaactgt ttatttttta acttttacaa 241 aagattttat tgttttatgt gcaccacatg cctgtctggt gccctggaag gccagacaag 301 ggcttcggat cccttgggac tggagctaca gacctctgca agccaccatg tggatgctgg 361 gaactgagct caggtcctct tcaagagcaa caagtgtcct tagctactga gtcatccttc 421 cagccgcaga ccacacagtg ctctgcttta gtattttctg agaagaggga ggtgggatga 481 actgggacca ctatggaaga aagagagcag tggacatgct aaacagacac atacttgaaa 541 ccagctttct taacaaaccc acaggggatc aaaatttcct tccctaaacc agagcagagc 601 tgtctgaaca caggttataa cccttaggca gagtgtaatc tcaggagcaa gggctgagaa 661 aggaaagcaa gagtgaactt gttcttatgc gcatgtgtag ctggcattct gtgggagata 721 ggaagggtag ccatagctat aatagtgcta aacgtgaatg aaaggtgccg agtgttggtg 781 actatttccc ataggaggta aggtttggca aatacacatg actactccaa gccaggctcc 841 agtctacaca caagatgcca gataggaaca ac //