LOCUS BG065541 583 bp mRNA linear EST 12-MAY-2010 DEFINITION H3032D01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3032D01 3', mRNA sequence. ACCESSION BG065541 VERSION BG065541.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 583) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065541.1. Other_ESTs: H3032D01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3032 row: D column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..583 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3032D01-3" /db_xref="taxon:10090" /clone="H3032D01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 140 c 133 g 138 t ORIGIN 1 gcatatagaa acaagggagc tttattggtt acaatattgt gctgcagagc caacagagag 61 cattacagcc aaaggataca tgcagacagg cagcttcaac tatacacatg cacccaagga 121 gccctgagcc actgcctgtg gctgtgccct gctttccaga ggcaggttct ggcctctctg 181 gtcccgtgct tggagcagga atgtagaagc tgctgcacct agactccaag gggcagaggt 241 gaagccagag ccacctgcct gggcaggtgt agaccaacag ctgaggcccc agcaaaggac 301 ctatcatgcg taagtttatt taagggctat ctacctttct agccctctca atctttaaaa 361 tacaaaaaaa tagactttat tctcttaaaa atacattcca ttcaatacat gttctgagct 421 gtgaagcagc aggaaaatag gacctctttc ctatgactct ggttgaggtg gtagaggaga 481 accctgttcc ccattcaggg tgtttaaaag ataatcccta aaaagcagct cttacaaagc 541 attctttgtc agaatagaaa cccatgccaa caaaggtggc cat //