LOCUS BG065314 649 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029F10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029F10 3', mRNA sequence. ACCESSION BG065314 VERSION BG065314.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 649) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065314.1. Other_ESTs: H3029F10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: F column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..649 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029F10-3" /db_xref="taxon:10090" /clone="H3029F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 197 a 135 c 117 g 200 t ORIGIN 1 gattatattt gctttgtttt gcacaaaaga gtaaaaagtt ttagttttat aatgggagaa 61 tatgaatata aactttttac tcttttgtgc aaaacaaagc aaatataatc aaaattataa 121 aattaacagt tcagcacaga aatgctgcta tgtcacagtc tgacgtgtcc aatctaccac 181 aaattttcag tgtttatgtt agaatcatga gttcttcctt gacaagccgc ctttcctgtc 241 acttgaatga acattaaaag tccagggtgt ttttccattt taagtgatca aagagcaaac 301 taacacaatt cggggctaag gaccaatcat tgtccaaaag ccaaacctat ctagaaaggg 361 tcaccataga gctgaagaca ggttcctccg ccatgggaat ccgctgcaca gatccaaact 421 cgtctttgat ctcatttcct tgggaagaca gtaaagccct tttcccctga agcagcaaca 481 gtgcttggag cttagttaca cgagggtgat gcatcgttca atagtaattc ctgttaattt 541 ttatactttt caatgtgctc acgagctatg atcagcctct gaatttgtgc agtaccttca 601 taaatctgat agatcttggc gtccctcatc agcttctcca cagggtact //