LOCUS BG065313 653 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029F09 3', mRNA sequence. ACCESSION BG065313 VERSION BG065313.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 653) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065313.1. Other_ESTs: H3029F09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: F column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..653 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029F09-3" /db_xref="taxon:10090" /clone="H3029F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 176 a 169 c 161 g 147 t ORIGIN 1 ccacataagc cctctgtttt aataaataaa gaatatttgt ggcttagatt ttaaatcaca 61 tttacagaga aggaagacta gacctaaaca gtaacagcga aggtagtgtt cctggaggaa 121 tgtgagtccc acatgcactt tatgcccaaa gagcagggac agcatgcaca actcactcta 181 gactagagca ggacagggaa agaatgggtc ctgggtgagg ccgtgcagca catctgaccc 241 tcccgtcctg ctgcaaaccc agtgaacagc tgtggcctca gatgagctgg ggctgggttc 301 ttgcccacac caagtggccc tgctgttgac actgagccga gggcattagc tgtagagggt 361 gtccactgat taccagtatt agaacagaaa gaggaagcca cacagataat ctgcttctcc 421 aggagaacag ccgtggggga actgctcctc ctgaagctca gtccagaaac ttcctattgg 481 catttgcacc aaacaaggct ccacggactt ctggcatcat ctgctgggct atcaggtcca 541 gccggctttc cagggtgttg gaaaccttta tcttgcgatc cccattatag atctcaacgc 601 caccagctat ttcctcaggc aggtaggcct cctggtcaat ctggacatca aca //