LOCUS BG065311 682 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029F07 3', mRNA sequence. ACCESSION BG065311 VERSION BG065311.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 682) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065311.1. Other_ESTs: H3029F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..682 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029F07-3" /db_xref="taxon:10090" /clone="H3029F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 136 a 180 c 136 g 230 t ORIGIN 1 gccttaaatg ttttattaca atcaaaattt cacaaacaga tcaattaatc tcaatcaaaa 61 taactcatgt ttacattgta tttatagaca agctgtacaa taaatatata aaacgcattc 121 acagtttgta gctcagtcat cttcttcttc ttcttcatca ctgatcacat acttcttatg 181 ctttttattc gctttgtcat cgtcttccgc tttcctcttt ccagaagatt caccttcctc 241 atcactgttg agcttctttg ctttgagtaa cctttgagct ttgtcttctt cggagccctc 301 atcactgtcc gaggagtaga ttctggctcg ttcctcgcgg atgccccctt tgtagcggtt 361 tttaatggca gccaggctga cggactcctc gccttcctcc tcctcgtcgt agcgatcagg 421 ctccaggtag ctggcgctca gccccgctgg tgctgtttct ctcgcatccg gcgctgctga 481 gactccctcc tgatggaggc cctcaggcgt tcttcttctt tcttaatcat ctctgtgcgc 541 tggcactcag ggtcacggcc agccattggt aagattcgaa tcttctgtgt ctttgagcat 601 ctatctgcaa gtgacagggt catcttcctg tgtgtggcac tgtctgtaga gtgaggcctg 661 aaggtgagct tcgttttaaa ga //